Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs17824322 chr14:77931223 C/T 1.61E-10 173 21.55 29.5 8.32 KM Plot
UCEC rs182458 chr1:54947932 A/G 0.000138 166 1.67 22.67 22.2 KM Plot
UCEC rs183639158 chr7:64178751 C/A 0 174 22.57 21.98 2.4 KM Plot
UCEC rs183784545 chr6:170728095 G/A 7.42E-5 168 22.08 25.3 13.63 KM Plot
UCEC rs1848094 chr15:84755681 C/T 6.18E-11 172 22.6 27.43 7.95 KM Plot
UCEC rs1848099 chr15:84728001 C/T 1.21E-5 172 14.23 27.33 22.6 KM Plot
UCEC rs185110784 chr7:64178395 C/T 0 174 22.57 21.98 2.4 KM Plot
UCEC rs1852265 chr15:84754346 G/A 5.59E-6 171 10.1 27.33 22.6 KM Plot
UCEC rs187883871 chr7:20669408 G/A 1.76E-11 170 22.63 20.13 4.33 KM Plot
UCEC rs188728652 chr7:64178271 G/A 0 174 22.57 21.98 2.4 KM Plot
UCEC rs189759944 chr3:48088408 C/A 6.44E-6 174 22.63 20.13 11.53 KM Plot
UCEC rs192743320 chr15:58191531 A/G 4.51E-9 168 22.93 20.25 9.62 KM Plot
UCEC rs1976815 chr4:57290993 T/A 0.00011 174 32.2 22.63 20.17 KM Plot
UCEC rs1989291 chr17:45807547 C/T 0.000103 167 22.9 22.88 17.73 KM Plot
UCEC rs199538628 chr3:48133040 AG/A 6.91E-6 173 22.63 21.6 11.53 KM Plot